[Carpet] CarpetLib/src/vect.hh: Assertion `d>=0 && d<D' failed ??
Bruno Giacomazzo
bgiacoma at sissa.it
Fri Jan 13 14:19:06 CET 2006
Hi,
I received the following error message from a run done with the
development version of Carpet and Cactus:
cactus_whisky_carpet_devel:
/home/people/bgiacoma/Cactus/arrangements/Carpet_devel/CarpetLib/src/vect.hh:168:
Assertion `d>=0 && d<D' failed.
This run start from a checkpoint and the only difference with the previous
run (the one that generated the checkpoint) is that now I activated
CarpetIOBasic instead of CactusBase/IOBasic.
I have attached the par file, the Thornlist, the config-info, the stdout
and stderr.
Thank you,
Bruno
--
Bruno Giacomazzo
PhD student - Astrophysics Sector
SISSA-ISAS (International School for Advanced Studies)
Via Beirut 4, 34014 Trieste, Italy
Tel. : +39 0403787558
Fax : +39 0403787528
email : bgiacoma at sissa.it
-------------------------------------------------
There are only 10 types of people in the world:
Those who understand binary, and those who don't
-------------------------------------------------
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!REPOSITORY_LOCATION cvs.cactuscode.org
!REPOSITORY_NAME /cactusdevcvs
!REPOSITORY_TYPE pserver
!REPOSITORY_USER cvs_anon
CactusBase/MoL
CactusBase/Boundary
CactusBase/CartGrid3D
CactusBase/CoordBase
CactusBase/IOASCII
CactusBase/IOUtil
CactusBase/Time
CactusBase/LocalInterp
CactusBase/SymBase
CactusBase/LocalReduce
CactusEinstein/ADMBase
CactusEinstein/ADMMacros
CactusEinstein/ADMCoupling
CactusEinstein/ADMConstraints
CactusEinstein/CoordGauge
CactusEinstein/StaticConformal
CactusEinstein/SpaceMask
CactusEinstein/Extract
CactusEinstein/PsiKadelia
CactusElliptic/EllBase
Carpet_devel/Carpet
Carpet_devel/CarpetIOASCII
Carpet_devel/CarpetIOHDF5
Carpet_devel/CarpetIOScalar
Carpet_devel/CarpetIOBasic
Carpet_devel/CarpetInterp
Carpet_devel/CarpetLib
Carpet_devel/CarpetReduce
Carpet_devel/CarpetRegrid
Carpet_devel/CarpetSlab
Carpet_devel/CarpetTest
CactusUtils/NaNChecker
CactusExternal/jpeg6b
##CactusExternal/LAPACK
##CactusExternal/BLAS
CactusIO/IOJpeg
CactusConnect/HTTPD
CactusConnect/HTTPDExtra
CactusConnect/Socket
!REPOSITORY_NAME /arrangements
!REPOSITORY_USER cvs_anon
CactusEOS/EOS_Base
CactusEOS/EOS_Ideal_Fluid
TAT/Slab
TAT/TATelliptic
TAT/TATJacobi
##TAT/TGRtensor
!REPOSITORY_LOCATION cvs.aei.mpg.de
!REPOSITORY_NAME /numrelcvs
!REPOSITORY_TYPE pserver
!REPOSITORY_USER bgiacoma
Excision/LegoExcision
!REPOSITORY_LOCATION cvs.aei.mpg.de
!REPOSITORY_NAME /numrelcvs
!REPOSITORY_TYPE pserver
!REPOSITORY_USER bgiacoma
AEIThorns/AHFinderDirect
AEIThorns/BSSN_MoL
AEIThorns/AEILocalInterp
AEIThorns/SphericalSurface
AEIThorns/Fortran
AEIDevelopment/RotatingSymmetry180
AEIDevelopment/WaveExtract
AEIDevelopment/ReflectionSymmetry
AEIDevelopment/ADMMass
##AEIDevelopment/IsolatedHorizon
!REPOSITORY_LOCATION cvs.eu-network.org
!REPOSITORY_NAME /EUNetwork
!REPOSITORY_TYPE pserver
!REPOSITORY_USER bgiacoma
EUHydro/EOS_Polytrope
EUHydro/Whisky_Init_Data
EUHydro/Whisky_RNSID
##EUHydro/Whisky_TOVSolver
!REPOSITORY_LOCATION cvs.aei.mpg.de
!REPOSITORY_NAME /numrelcvs
!REPOSITORY_MODULE HawkeCVS/EUHydro_Dev/Whisky
!REPOSITORY_TYPE pserver
!REPOSITORY_USER bgiacoma
!REPOSITORY_MODULE HawkeCVS/EUHydro_Dev/Whisky
EUHydro_Dev/Whisky
EUHydro_Dev/EOS_Table_Reader
EUHydro_Dev/Whisky_TATIVP
EUHydro_Dev/WhiskyModePower
Parma_Dev/Whisky_Hydro_Analysis
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# CONFIGURATION : whisky_carpet_devel
# CONFIG-DATE : Thu Jan 12 20:37:26 2006 (GMT)
# CONFIG-HOST : albert.pr.infn.it
# CONFIG-STATUS : 0
# CONFIG-OPTIONS :
CC=icc
CXX=icc
F77=ifc
F90=ifc
FPP=${PERL} ${CCTK_HOME}/lib/sbin/cpp.pl
HDF5=yes
HDF5_DIR=/opt/intel/compiler70/hdf5
MPI=CUSTOM
MPI_INC_DIRS=/opt/intel/compiler70/lam-7.1/include
MPI_LIBS=pthread pbs nsl lammpio lamf77mpi mpi lam util dl
MPI_LIB_DIRS=/opt/intel/compiler70/lam-7.1/lib
THORNLIST=Whisky_Carpet_devel.th
THORNLIST_DIR=thornlists
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ActiveThorns = "Carpet LocalReduce CarpetLib CarpetRegrid CarpetInterp CarpetReduce CarpetSlab cartgrid3d boundary admbase staticconformal spacemask admcoupling coordgauge admmacros whisky whisky_init_data eos_base eos_polytrope eos_ideal_fluid time mol nanchecker whisky_rnsid CarpetIOBasic CarpetIOScalar CarpetIOASCII ioutil admconstraints CarpetIOHDF5 bssn_mol coordbase aeilocalinterp legoexcision localinterp sphericalsurface symbase slab ahfinderdirect whiskymodepower Whisky_Hydro_Analysis ADMMass"
ActiveThorns = "waveextract"
ActiveThorns = "reflectionsymmetry"
##ActiveThorns = "TATJacobi TATElliptic Whisky_TATIVP"
IOScalar::outScalar_vars = " admbase::metric admbase::curv admbase::lapse admbase::shift adm_bssn::adm_bssn_phi adm_bssn::adm_bssn_metric adm_bssn::adm_bssn_curv adm_bssn::adm_bssn_k adm_bssn::adm_bssn_gamma admconstraints::momentum admconstraints::ham whisky::whisky_prim_vector_var whisky::whisky_prim_scalar_var whisky::whisky_cons_vector_var whisky::whisky_cons_scalar_var whisky::whisky_quadrupole whisky::whisky_masses whisky::whisky_angular_momentum whisky_hydro_analysis::hydro_quadrupole whisky_hydro_analysis::hydro_angular_momentum whisky_hydro_analysis::hydro_center_mass whisky_hydro_analysis::hydro_modes whisky::whisky_total_rest_mass whisky::whisky_masses_fractions"
IOBasic::outInfo_vars = " whisky::rho admbase::alp "
IOASCII::out1D_vars = " admbase::metric admbase::curv admbase::lapse admbase::shift adm_bssn::adm_bssn_phi adm_bssn::adm_bssn_metric{out_every=1} adm_bssn::adm_bssn_curv adm_bssn::adm_bssn_k adm_bssn::adm_bssn_gamma admconstraints::momentum admconstraints::ham whisky::whisky_prim_vector_var whisky::whisky_prim_scalar_var whisky::whisky_cons_vector_var whisky::whisky_cons_scalar_var whisky::whisky_quadrupole_temps"
IO::strict_io_parameter_check="yes"
IO::parfile_write = "generate"
#======================================
# IVP Solver (TATIVP)
#======================================
#whisky_tativp::solve_whisky_ivp = "yes"
#whisky_tativp::whisky_ivp_tolerance = 1.e-10
#======================================
# Whisky with PPM parameters
#======================================
whisky::whisky_rho_central = 9.02479e-01
whisky::riemann_solver = "Marquina"
whisky::whisky_eos_type = "General"
whisky::whisky_eos_table = "Ideal_Fluid"
whisky::recon_method = "ppm"
whisky::ppm_detect = "yes"
whisky::whisky_stencil = 3
whisky::bound = "none"
#======================================
# MoL parameters with Whisky
#======================================
mol::ode_method = "icn"
adm_bssn::bssn_maxnumsandrvars = 0
whisky::whisky_maxnumsandrvars = 0
adm_bssn::timelevels = 3
whisky::timelevels = 3
#======================================
# Whisky atmosphere parameters
#======================================
whisky::rho_rel_min = 3.e-7
whisky::initial_atmosphere_factor = 0.9
whisky::initial_rho_abs_min = 5.e-13
whisky::EoS_Change = "no"
whisky::EoS_Change_type = "K"
whisky::initial_k = 1.0
whisky::c2p_reset_pressure = "yes"
#================================================
# Whisky: For computing masses within given radii
#================================================
whisky::compute_angular_momentum = "yes"
whisky::compute_masses = "yes"
whisky::masses_nr = 4
whisky::reference_radius[1] = 1.5
whisky::reference_radius[2] = 0.5
whisky::reference_radius[3] = 0.2
whisky::reference_radius[4] = 0.05
#================================================
# Whisky_Hydro_Analysis
#================================================
Whisky_Hydro_Analysis::compute_hydro_quadrupole = "yes"
Whisky_Hydro_Analysis::mass_radius_1 = 0.05
Whisky_Hydro_Analysis::mass_radius_2 = 1.0
Whisky_Hydro_Analysis::mass_radius_3 = 1.5
Whisky_Hydro_Analysis::modes_radius_min = 0.0
Whisky_Hydro_Analysis::modes_radius_max = 1.5
#======================================
# RNSID initial data with the EOS changed
#======================================
admbase::initial_data = "rnsid"
admbase::initial_lapse = "rnsid"
admbase::initial_shift = "rnsid"
admbase::metric_type = "physical"
rnsid::rotation_type = "diff"
rnsid::A_diff = 1.4
rnsid::axes_ratio = 0.52
rnsid::accuracy = 1e-6
rnsid::cf = 0.4
rnsid::consistent_boundaries = "yes"
rnsid::MDIV = 301
rnsid::SDIV = 601
rnsid::RNS_Gamma = 3.0
rnsid::RNS_K = 1.0
eos_polytrope::eos_gamma = 3.0
eos_polytrope::eos_k = 0.98
eos_ideal_fluid::eos_ideal_fluid_gamma = 3.0
#======================================
# Whisky output
#======================================
IO::out_dir = "data"
IOScalar::outScalar_dir = "data/Scalar"
IOASCII::out1D_dir = "data/1d"
IO::out_unchunked = "no"
IO::out_mode = "proc"
# 1D output
IOScalar::outScalar_every = 8
IOASCII::out1D_every = 16
IOBasic::outInfo_every = 2
#====================================================================
# Whisky output
#====================================================================
# 3D output
IOHDF5::out3D_every = 32
IOHDF5::out_dir = "data/hdf5"
# save disk space by using single precision and downsampling
IO::out_single_precision = "yes"
IOHDF5::out3D_vars = "whisky::whisky_prim_vector_var whisky::rho whisky::eps"
#======================================
# BSSN as run with Whisky
#======================================
admmacros::spatial_order = 2
admbase::evolution_method = "adm_bssn"
admbase::lapse_evolution_method = "1+log"
admbase::shift_evolution_method = "gamma2"
adm_bssn::lapsesource = "modified"
adm_bssn::bound = "radiative"
boundary::radpower = 2
adm_bssn::harmonic_f = 2.0
adm_bssn::ShiftGammaCoeff = 0.75
adm_bssn::BetaDriver = 3
#==============================================================================
# GRID used by Whisky
#==============================================================================
Carpet::domain_from_coordbase = "yes"
Carpet::verbose = "yes"
#Carpet::enable_all_storage = "no"
time::dtfac = 0.375
grid::type = "coordbase"
grid::avoid_origin = "no"
coordbase::boundary_size_z_lower = 3 #ghost size
coordbase::boundary_shiftout_z_lower = 1 #due to avoid_origin="no"
carpetregrid::smart_outer_boundaries = "yes"
reflectionsymmetry::reflection_z = "yes"
reflectionsymmetry::avoid_origin_z = "no"
coordbase::xmin = -1.60
coordbase::xmax = 1.60
coordbase::ymin = -1.60
coordbase::ymax = 1.60
coordbase::zmin = 0.0
coordbase::zmax = 1.92
coordbase::dx = 0.04
coordbase::dy = 0.04
coordbase::dz = 0.012
carpetregrid::verbose = "yes"
carpetregrid::refined_regions = "manual-coordinate-list"
carpetregrid::coordinates = "[
[ ([-0.8,-0.8,0.0 ]:[0.8,0.8,1.5 ]:[0.02,0.02,0.006])]]"
#level1 80*80*250
#level0 80*80*160
carpet::max_refinement_levels = 2
carpetregrid::refinement_levels = 2
carpetlib::save_memory_during_regridding = "yes"
#carpetlib::max_allowed_memory_MB = 750
CarpetLib::print_memstats_every = 16
carpetregrid::keep_same_grid_structure = "yes"
carpet::prolongation_order_space = 3
carpet::prolongation_order_time = 2
carpet::buffer_width = 6
carpet::init_3_timelevels = "no" #"yes"
driver::ghost_size = 3
cactus::cctk_itlast = 2000000
#==============================================================================
# AHFinderDirect parameters for a single star collapse
#==============================================================================
ahfinderdirect::N_horizons = 3
ahfinderdirect::find_every = 32
ahfinderdirect::max_allowable_horizon_radius[1] = 0.7
ahfinderdirect::max_allowable_horizon_radius[2] = 0.7
ahfinderdirect::max_allowable_horizon_radius[3] = 0.7
ahfinderdirect::initial_guess__coord_sphere__radius[1] = 0.01
ahfinderdirect::initial_guess__coord_sphere__radius[2] = 0.1
ahfinderdirect::initial_guess__coord_sphere__radius[3] = 0.3
#==============================================================================
# Excise hydro and spacetime
#==============================================================================
spacemask::use_mask = "true"
adm_bssn::excise = "yes"
adm_bssn::excisionType = "lego"
ahfinderdirect::set_mask_for_all_horizons = "true"
ahfinderdirect::set_old_style_mask = "true"
ahfinderdirect::set_new_style_mask = "true"
ahfinderdirect::mask_radius_multiplier = 0.6
ahfinderdirect::mask_radius_offset = 0.0
ahfinderdirect::mask_buffer_thickness = 0.0
ahfinderdirect::new_style_mask_bitfield_name = "Hydro_Excision"
ahfinderdirect::new_style_mask_inside_value = "excised"
ahfinderdirect::new_style_mask_buffer_value = "normal"
ahfinderdirect::new_style_mask_outside_value = "normal"
# Checkpoint parameters
iohdf5::checkpoint = "yes"
io::recover = "auto"
io::recover_dir = "/home/people/bgiacoma/C-N05-A14.4492.CHKPT"
io::checkpoint_every = 1024
IO::checkpoint_dir = "data/CHECKPOINT"
io::checkpoint_keep=1
# wave extraction
waveextract::active = "yes"
waveextract::out_every = 32
waveextract::interpolation_operator = "Lagrange polynomial interpolation"
waveextract::interpolation_order = 2
waveextract::maximum_detector_number = 5
waveextract::switch_output_format = 20
waveextract::rsch2_computation = "average Schwarzschild metric"
waveextract::verbose = 1
waveextract::l_mode = 5
waveextract::m_mode = 5
waveextract::detector_radius[0] = 0.5
waveextract::detector_radius[1] = 0.8
waveextract::detector_radius[2] = 1.1
waveextract::detector_radius[3] = 1.4
waveextract::detector_radius[4] = 1.5
#============================================================
# Mode power
#============================================================
whiskymodepower::n_rings = 9
whiskymodepower::ring_radius[0] = 0.01
whiskymodepower::ring_radius[1] = 0.02
whiskymodepower::ring_radius[2] = 0.1
whiskymodepower::ring_radius[3] = 0.2
whiskymodepower::ring_radius[4] = 0.4
whiskymodepower::ring_radius[5] = 0.6
whiskymodepower::ring_radius[6] = 0.8
whiskymodepower::ring_radius[7] = 1.0
whiskymodepower::ring_radius[8] = 1.5
#whiskymodepower::ring_radius[9] = 2.0
whiskymodepower::n_m_modes = 6
whiskymodepower::ring_rin = 1
whiskymodepower::ring_rout = 7
whiskymodepower::n_angles = 80
ADMMass::ADMMass_use_surface_distance_as_volume_radius = "no"
ADMMass::ADMMass_use_all_volume_as_volume_radius = "yes"
ADMMass::ADMMass_distance_from_grid_boundary[0] = 0.024
CarpetIOASCII::out0D_every = 8
CarpetIOASCII::out0D_vars = "admmass::ADMMass_Masses"
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